Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc112A0AUP1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ccdc112A0AUP1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc112A0AUP1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Mir770-201ENSMUST00000103252 94 ntBASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms