Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm18958-201ENSMUST00000174258 762 ntBASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhgb8A0A140LI48 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm26039-201ENSMUST00000158152 144 ntBASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm7367-201ENSMUST00000057611 492 ntBASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhgb8A0A140LI48 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Actl10-202ENSMUST00000226583 1501 ntBASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhgb8A0A140LI48 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.35□□□□□ -0.11
Pcdhgb8A0A140LI48 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms