Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm18421-201ENSMUST00000204122 625 ntBASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13d-4A0A0G2JFX3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mir5122-201ENSMUST00000175004 89 ntBASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm44450-201ENSMUST00000199528 114 ntBASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms