Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Ank2-226ENSMUST00000189368 339 ntBASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv30A0A0B4J1P1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv30A0A0B4J1P1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Mir6404-201ENSMUST00000183699 94 ntBASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv30A0A0B4J1P1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm9103-201ENSMUST00000119371 405 ntBASIC11.93□□□□□ -0.5
Trbv30A0A0B4J1P1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms