Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm12895-201ENSMUST00000122214 226 ntBASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbc1A0A0A6YWV4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Trbc1A0A0A6YWV4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm44454-201ENSMUST00000198541 138 ntBASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbc1A0A0A6YWV4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbc1A0A0A6YWV4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms