Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm13474-201ENSMUST00000122466 815 ntBASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Sybu-209ENSMUST00000228639 4113 ntBASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6n-6A0A075B6B2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms