Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm7284-201ENSMUST00000131667 944 ntBASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm10819-201ENSMUST00000099988 561 ntBASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-7A0A075B6B0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-7A0A075B6B0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms