Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.02□□□□□ -0.32
Trav18A0A075B656 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Gm22697-201ENSMUST00000175194 63 ntBASIC13.02□□□□□ -0.33
Trav18A0A075B656 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.02□□□□□ -0.33
Trav18A0A075B656 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav18A0A075B656 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.01□□□□□ -0.33
Trav18A0A075B656 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav18A0A075B656 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Trav18A0A075B656 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav18A0A075B656 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav18A0A075B656 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
Trav18A0A075B656 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav18A0A075B656 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Gm10052-201ENSMUST00000168019 960 ntBASIC13□□□□□ -0.33
Trav18A0A075B656 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13□□□□□ -0.33
Trav18A0A075B656 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13□□□□□ -0.33
Trav18A0A075B656 Gm18101-201ENSMUST00000215769 548 ntBASIC13□□□□□ -0.33
Trav18A0A075B656 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Gm7729-201ENSMUST00000050143 801 ntBASIC13□□□□□ -0.33
Trav18A0A075B656 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav18A0A075B656 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav18A0A075B656 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav18A0A075B656 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms