Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Zfp783-201ENSMUST00000095946 670 ntBASIC10.71□□□□□ -0.69
Trav3-4A0A075B654 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-4A0A075B654 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Trav3-4A0A075B654 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-4A0A075B654 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-4A0A075B654 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.71□□□□□ -0.7
Trav3-4A0A075B654 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-4A0A075B654 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms