Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.29□□□□□ -0.44
Trav16A0A075B653 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.29□□□□□ -0.44
Trav16A0A075B653 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.28□□□□□ -0.44
Trav16A0A075B653 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 App-207ENSMUST00000227737 2827 ntBASIC12.28□□□□□ -0.44
Trav16A0A075B653 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16A0A075B653 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.27□□□□□ -0.44
Trav16A0A075B653 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16A0A075B653 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.27□□□□□ -0.45
Trav16A0A075B653 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.27□□□□□ -0.45
Trav16A0A075B653 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav16A0A075B653 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Trmt13-210ENSMUST00000198454 880 ntBASIC12.27□□□□□ -0.45
Trav16A0A075B653 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms