Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm11336-201ENSMUST00000118168 334 ntBASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm10653-202ENSMUST00000139570 835 ntBASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm21814-202ENSMUST00000203277 873 ntBASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm20760-201ENSMUST00000179197 648 ntBASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-2-dv6-2A0A075B650 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms