Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-1A0A075B644 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm15165-201ENSMUST00000118140 502 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm15372-201ENSMUST00000120729 834 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Mir8098-201ENSMUST00000184011 137 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm27459-201ENSMUST00000184860 107 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Birc2-201ENSMUST00000054878 378 ntBASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-1A0A075B644 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms