Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Gm37856-201ENSMUST00000191634 999 ntBASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Phf7-203ENSMUST00000226565 1971 ntBASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16nA0A075B634 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Gm5643-201ENSMUST00000117081 966 ntBASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16nA0A075B634 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Gm12441-201ENSMUST00000121806 588 ntBASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Gm36967-201ENSMUST00000193814 266 ntBASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16nA0A075B634 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms