Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm2274-201ENSMUST00000184539 609 ntBASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm8520-201ENSMUST00000186517 868 ntBASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Mir5122-201ENSMUST00000175004 89 ntBASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms