Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav10nA0A075B622 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Prob1-201ENSMUST00000097619 3021 ntBASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav10nA0A075B622 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav10nA0A075B622 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav10nA0A075B622 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.08□□□□□ -0.15
Trav10nA0A075B622 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav10nA0A075B622 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Gm14859-201ENSMUST00000117752 357 ntBASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms