Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm37292-201ENSMUST00000192062 758 ntBASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16d-dv11A0A075B617 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Mir5133-201ENSMUST00000174955 77 ntBASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16d-dv11A0A075B617 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Actl10-202ENSMUST00000226583 1501 ntBASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms