Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Trav4n-4A0A075B615 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gm11927-201ENSMUST00000118472 759 ntBASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4n-4A0A075B615 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gm6139-201ENSMUST00000079261 882 ntBASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms