Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-5A0A075B604 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 AC160338.1-201ENSMUST00000214232 705 ntBASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-5A0A075B604 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Rps4l-201ENSMUST00000071745 943 ntBASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-5A0A075B604 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-5A0A075B604 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7n-5A0A075B604 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.97□□□□□ -0.33
Trav7n-5A0A075B604 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-5A0A075B604 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-5A0A075B604 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms