Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm2651-201ENSMUST00000203560 838 ntBASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm19164-201ENSMUST00000210667 640 ntBASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav5-1A0A075B5Z7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-1A0A075B5Z7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-1A0A075B5Z7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-1A0A075B5Z7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5-1A0A075B5Z7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm15173-201ENSMUST00000122049 433 ntBASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-1A0A075B5Z7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Mir5131-201ENSMUST00000175426 93 ntBASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm6550-201ENSMUST00000187574 993 ntBASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 AV026068-213ENSMUST00000223675 1171 ntBASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms