Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav1A0A075B5Z4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav1A0A075B5Z4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav1A0A075B5Z4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav1A0A075B5Z4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms