Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Gm18889-201ENSMUST00000174284 929 ntBASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.83■□□□□ 0.77
Hdac6Q9Z2V5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac6Q9Z2V5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac6Q9Z2V5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Haglr-201ENSMUST00000100000 2085 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Rprl2-201ENSMUST00000157150 290 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Rpph1-201ENSMUST00000175096 319 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Gm25948-201ENSMUST00000175334 112 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac6Q9Z2V5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac6Q9Z2V5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms