Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Gm18669-201ENSMUST00000216049 778 ntBASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
Cldn13Q9Z0S4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn13Q9Z0S4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Gm10052-201ENSMUST00000168019 960 ntBASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn13Q9Z0S4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn13Q9Z0S4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms