Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClcnkaQ9WUB7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Gm15794-201ENSMUST00000120182 631 ntBASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClcnkaQ9WUB7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Prob1-201ENSMUST00000097619 3021 ntBASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ClcnkaQ9WUB7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Gm7284-201ENSMUST00000131667 944 ntBASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Gm27704-201ENSMUST00000185094 107 ntBASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ClcnkaQ9WUB7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms