Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn8aQ9WTU3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn8aQ9WTU3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scn8aQ9WTU3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn8aQ9WTU3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn8aQ9WTU3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn8aQ9WTU3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Gm10175-201ENSMUST00000086013 645 ntBASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.91■□□□□ 0.14
Scn8aQ9WTU3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Scn8aQ9WTU3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Scn8aQ9WTU3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Gm43514-201ENSMUST00000198852 424 ntBASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn8aQ9WTU3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms