Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf40aQ9R1C7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf40aQ9R1C7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40aQ9R1C7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Gm21362-201ENSMUST00000194272 928 ntBASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40aQ9R1C7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40aQ9R1C7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.45■□□□□ 0.38
Prpf40aQ9R1C7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40aQ9R1C7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40aQ9R1C7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40aQ9R1C7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms