Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Gm15565-201ENSMUST00000118890 427 ntBASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfwd2Q9R1A8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Mir6982-201ENSMUST00000184354 68 ntBASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfwd2Q9R1A8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Gm16061-201ENSMUST00000122167 857 ntBASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfwd2Q9R1A8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Actl10-202ENSMUST00000226583 1501 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm7889-201ENSMUST00000185591 958 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfwd2Q9R1A8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.36■□□□□ 0.21
Rfwd2Q9R1A8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms