Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RpgrQ9R0X5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Gm23634-201ENSMUST00000175071 91 ntBASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RpgrQ9R0X5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Gm44450-201ENSMUST00000199528 114 ntBASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RpgrQ9R0X5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Gm18421-201ENSMUST00000204122 625 ntBASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RpgrQ9R0X5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RpgrQ9R0X5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RpgrQ9R0X5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms