Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.93□□□□□ -0.18
Nubp1Q9R060 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Gm7506-201ENSMUST00000207758 815 ntBASIC13.93□□□□□ -0.18
Nubp1Q9R060 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nubp1Q9R060 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.92□□□□□ -0.18
Nubp1Q9R060 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gm11780-201ENSMUST00000136880 516 ntBASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.92□□□□□ -0.18
Nubp1Q9R060 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nubp1Q9R060 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Gm14913-201ENSMUST00000120011 1093 ntBASIC13.91□□□□□ -0.18
Nubp1Q9R060 Gm11764-201ENSMUST00000120221 623 ntBASIC13.91□□□□□ -0.18
Nubp1Q9R060 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Gm9723-201ENSMUST00000192100 457 ntBASIC13.91□□□□□ -0.18
Nubp1Q9R060 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nubp1Q9R060 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms