Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Gm7461-201ENSMUST00000058918 827 ntBASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcf1Q9QZM3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Gm43347-201ENSMUST00000200226 580 ntBASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcf1Q9QZM3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms