Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1aQ9QWF0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Gm18959-201ENSMUST00000208954 655 ntBASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1aQ9QWF0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1aQ9QWF0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1aQ9QWF0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1aQ9QWF0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms