Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Gm45657-201ENSMUST00000211318 1349 ntBASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Gm18421-201ENSMUST00000204122 625 ntBASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Gm21147-201ENSMUST00000186046 913 ntBASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Gm29013-201ENSMUST00000187431 237 ntBASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh5Q9QUM7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gm11355-201ENSMUST00000121120 306 ntBASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gm36967-201ENSMUST00000193814 266 ntBASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gm42919-201ENSMUST00000197753 1284 ntBASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms