Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl28Q9JIL2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl28Q9JIL2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm6433-201ENSMUST00000118634 875 ntBASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm27389-201ENSMUST00000183622 195 ntBASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl28Q9JIL2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl28Q9JIL2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms