Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Gm27742-201ENSMUST00000184667 60 ntBASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Gm17807-201ENSMUST00000186869 298 ntBASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a3bpQ9EQG9 Asic1-205ENSMUST00000228185 1818 ntBASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col4a3bpQ9EQG9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Col4a3bpQ9EQG9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Col4a3bpQ9EQG9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.2■□□□□ 0.5
Col4a3bpQ9EQG9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a3bpQ9EQG9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms