Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp1bQ9EPL6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp1bQ9EPL6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm11539-201ENSMUST00000119837 557 ntBASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm13436-201ENSMUST00000120418 567 ntBASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm36967-201ENSMUST00000193814 266 ntBASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp1bQ9EPL6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gm15565-201ENSMUST00000118890 427 ntBASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp1bQ9EPL6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Gm13559-201ENSMUST00000120476 863 ntBASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Gm13474-201ENSMUST00000122466 815 ntBASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Gm43799-201ENSMUST00000201845 579 ntBASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Gm18115-201ENSMUST00000221209 621 ntBASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp1bQ9EPL6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp1bQ9EPL6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp1bQ9EPL6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms