Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Mir3113-201ENSMUST00000175478 76 ntBASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Mir8117-201ENSMUST00000184773 107 ntBASIC16.06■□□□□ 0.16
Necab3Q9D6J4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Gm19164-201ENSMUST00000210667 640 ntBASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Necab3Q9D6J4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Necab3Q9D6J4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Gm14822-201ENSMUST00000122247 291 ntBASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Gm4899-201ENSMUST00000178708 719 ntBASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Necab3Q9D6J4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm23935-201ENSMUST00000102303 57 ntBASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm24270-201ENSMUST00000102326 57 ntBASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm24245-201ENSMUST00000157318 57 ntBASIC16.03■□□□□ 0.16
Necab3Q9D6J4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Gm10175-201ENSMUST00000086013 645 ntBASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Necab3Q9D6J4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms