Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShpkQ9D5J6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.31□□□□□ -0.28
ShpkQ9D5J6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShpkQ9D5J6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Gm6211-202ENSMUST00000167849 925 ntBASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShpkQ9D5J6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms