Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc7Q9D541 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc7Q9D541 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc7Q9D541 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc7Q9D541 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc7Q9D541 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc7Q9D541 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Gm45328-201ENSMUST00000210942 917 ntBASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc7Q9D541 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm13312-201ENSMUST00000119631 718 ntBASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm25406-201ENSMUST00000157599 105 ntBASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm29518-201ENSMUST00000190858 372 ntBASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc7Q9D541 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Gm17808-201ENSMUST00000200859 894 ntBASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc7Q9D541 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc7Q9D541 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms