Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Lonrf3Q9D4H7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Gm15173-201ENSMUST00000122049 433 ntBASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lonrf3Q9D4H7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Gm25990-201ENSMUST00000102440 86 ntBASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Gm11780-201ENSMUST00000136880 516 ntBASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Gm2651-201ENSMUST00000203560 838 ntBASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lonrf3Q9D4H7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm8825-201ENSMUST00000182565 998 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm4518-201ENSMUST00000182638 718 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm8655-201ENSMUST00000221159 852 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lonrf3Q9D4H7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms