Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.71□□□□□ -0.06
Trim13Q9CYB0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.71□□□□□ -0.06
Trim13Q9CYB0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trim13Q9CYB0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trim13Q9CYB0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Asic1-205ENSMUST00000228185 1818 ntBASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim13Q9CYB0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms