Protein–RNA interactions for Protein: Q9CY57

Chtop, Chromatin target of PRMT1 protein, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChtopQ9CY57 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChtopQ9CY57 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.25□□□□□ -0.45
ChtopQ9CY57 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.25□□□□□ -0.45
ChtopQ9CY57 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChtopQ9CY57 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Gm13148-201ENSMUST00000118892 745 ntBASIC12.24□□□□□ -0.45
ChtopQ9CY57 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.24□□□□□ -0.45
ChtopQ9CY57 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChtopQ9CY57 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Dio3-201ENSMUST00000097228 1449 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Gm13158-201ENSMUST00000122007 736 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Mir5133-201ENSMUST00000174955 77 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.23□□□□□ -0.45
ChtopQ9CY57 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ChtopQ9CY57 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms