Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.64■□□□□ 0.57
Hdac9Q99N13 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.64■□□□□ 0.57
Hdac9Q99N13 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.64■□□□□ 0.57
Hdac9Q99N13 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac9Q99N13 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac9Q99N13 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Mir1895-201ENSMUST00000122615 79 ntBASIC18.62■□□□□ 0.57
Hdac9Q99N13 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Gm8396-201ENSMUST00000057361 823 ntBASIC18.62■□□□□ 0.57
Hdac9Q99N13 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac9Q99N13 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac9Q99N13 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gm44872-201ENSMUST00000207864 420 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac9Q99N13 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.61■□□□□ 0.57
Hdac9Q99N13 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Gm27494-201ENSMUST00000184735 189 ntBASIC18.6■□□□□ 0.57
Hdac9Q99N13 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.6■□□□□ 0.57
Hdac9Q99N13 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.6■□□□□ 0.57
Hdac9Q99N13 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac9Q99N13 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac9Q99N13 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms