Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf111Q99ML9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf111Q99ML9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf111Q99ML9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms