Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaipQ99ME3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.42■□□□□ 0.22
SncaipQ99ME3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.41■□□□□ 0.22
SncaipQ99ME3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.41■□□□□ 0.22
SncaipQ99ME3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.4■□□□□ 0.22
SncaipQ99ME3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SncaipQ99ME3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaipQ99ME3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Ank2-226ENSMUST00000189368 339 ntBASIC16.39■□□□□ 0.21
SncaipQ99ME3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.39■□□□□ 0.21
SncaipQ99ME3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SncaipQ99ME3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SncaipQ99ME3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SncaipQ99ME3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms