Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Gm44454-201ENSMUST00000198541 138 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Gm43514-201ENSMUST00000198852 424 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Gm6443-201ENSMUST00000203599 874 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Birc2-201ENSMUST00000054878 378 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Dancr-204ENSMUST00000132389 2347 ntBASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr3Q99MB1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Gm34391-201ENSMUST00000203706 907 ntBASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tlr3Q99MB1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Mir8098-201ENSMUST00000184011 137 ntBASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tlr3Q99MB1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tlr3Q99MB1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Tlr3Q99MB1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tlr3Q99MB1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tlr3Q99MB1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Gm5864-201ENSMUST00000202263 970 ntBASIC17.01■□□□□ 0.31
Tlr3Q99MB1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.01■□□□□ 0.31
Tlr3Q99MB1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17■□□□□ 0.31
Tlr3Q99MB1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17■□□□□ 0.31
Tlr3Q99MB1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Tlr3Q99MB1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17■□□□□ 0.31
Tlr3Q99MB1 Gm25406-201ENSMUST00000157599 105 ntBASIC17■□□□□ 0.31
Tlr3Q99MB1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tlr3Q99MB1 Gm8349-201ENSMUST00000182720 1003 ntBASIC17■□□□□ 0.31
Tlr3Q99MB1 Gm43347-201ENSMUST00000200226 580 ntBASIC17■□□□□ 0.31
Tlr3Q99MB1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms