Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcc1Q99LI2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcc1Q99LI2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcc1Q99LI2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcc1Q99LI2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Gm5867-201ENSMUST00000063197 592 ntBASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcc1Q99LI2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.65■□□□□ 0.1
Clcc1Q99LI2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm8655-201ENSMUST00000221159 852 ntBASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm15590-201ENSMUST00000078419 552 ntBASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms