Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lysmd3Q99LE3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lysmd3Q99LE3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
Lysmd3Q99LE3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lysmd3Q99LE3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd3Q99LE3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd3Q99LE3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms