Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Gm11025-201ENSMUST00000140773 466 ntBASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcd2Q99JR8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Smarcd2Q99JR8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Smarcd2Q99JR8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gm15920-201ENSMUST00000118998 402 ntBASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gm44492-201ENSMUST00000197012 141 ntBASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcd2Q99JR8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16■□□□□ 0.15
Smarcd2Q99JR8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 AC122024.2-201ENSMUST00000220086 871 ntBASIC16■□□□□ 0.15
Smarcd2Q99JR8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcd2Q99JR8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Auts2-212ENSMUST00000178555 309 ntBASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcd2Q99JR8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Gm14701-201ENSMUST00000117156 348 ntBASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcd2Q99JR8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms