Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Gm11452-201ENSMUST00000122376 690 ntBASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Mir8098-201ENSMUST00000184011 137 ntBASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdha2Q91Y17 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Gm6376-201ENSMUST00000209407 580 ntBASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha2Q91Y17 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdha2Q91Y17 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdha2Q91Y17 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Gm25990-201ENSMUST00000102440 86 ntBASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Gm7862-201ENSMUST00000121461 292 ntBASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Gm28659-201ENSMUST00000188013 759 ntBASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha2Q91Y17 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Dancr-204ENSMUST00000132389 2347 ntBASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha2Q91Y17 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms