Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Gm17971-201ENSMUST00000190239 806 ntBASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha3Q91Y16 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Gm44454-201ENSMUST00000198541 138 ntBASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha3Q91Y16 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha3Q91Y16 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha3Q91Y16 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms