Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.53■□□□□ 0.56
Pcdhb22Q91XZ8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Gm24589-201ENSMUST00000116692 94 ntBASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Gm43347-201ENSMUST00000200226 580 ntBASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb22Q91XZ8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb22Q91XZ8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb22Q91XZ8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb22Q91XZ8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb22Q91XZ8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhb22Q91XZ8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Gm18622-201ENSMUST00000219361 595 ntBASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb22Q91XZ8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Gm7153-201ENSMUST00000117092 455 ntBASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb22Q91XZ8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms